e-mail: lisa.schwarz@ucsc.edu
phone: (406) 570-2257
office hours: by appointment
office (if you want to visit me in Santa Cruz):
Long Marine Lab, Center for Ocean Health, Room 148B
Multivariate Statistics
Papers to review:
Principle Components Analysis: PCA_spider webs, PCA_fish
Cluster Analysis: CA_leopard sharks, CA_species commonness
Discriminant Analysis: DA_coot sex, DA_fish scales
Canonical Correlation Analysis: CCorrelA_buffalo
Tentative Schedule:
Oct. 15 (half lecture): Introduction to Multivariate Statistics
Class Notes: Lecture1_Intro to Multivariate Statistics
Oct. 20: Principal Components Analysis
Class Notes: Lecture2_Principal Components Analysis
Homework and Code: CSUMB 550 Homework 6a , HW6_PCA.R
Data: CalSeaLionDivesLtd , BND_Morphs_example
Oct. 22: Dr Eric Crandall (guest lecture)
Oct. 27: Dr Nate Jue (guest lecture)
Oct. 29: Cluster Analysis
Class notes: Lecture3_Cluster Analysis, ClusterValidationMetrics
Homework: CSUMB 550 Homework 6b
Newest code: ClusterAnalysis2.R
clValid documentation: click here
Article where the data were analyzed: Villegas-Amtmann et al. 2011
NOTE: You have been provided with a small subset of her data, so do not expect similar answers.
Nov. 3: Discriminant Analysis
Class notes: Lecture4_Discriminant Analysis
Newest code: DiscriminantExample2.R
Example data: DiscSample
Homework and homework data: CSUMB 550 Homework 6c, RemoteData
Nov. 5: Canonical Correlation Analysis
Class notes: Lecture 5_Canonical Correlation
Example data: mmreg
Newest code and interpretation example: CanCorrelExample2.R , CanCorrInterpretation
Homework and homework data: CSUMB 550 Homework 6d, HappyDolphins